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| Kingdom | Bacteria Cavalier-Smith, 2002
– bactéries, bacteria, bacterias, bactérias |
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| Subkingdom | Negibacteria Cavalier-Smith, 2002
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| Phylum | Proteobacteria Garrity et al., 2005
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| Class | Gammaproteobacteria Garrity et al., 2005
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| Order | Thiotrichales Garrity et al., 2005
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| Family | Thiotrichaceae Garrity et al., 2005
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| Genus | Thiothrix Winogradsky, 1888 emend. Howarth et al., 1999 emend. Aruga et al., 2002 |
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Direct Children: |
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| Species | Thiothrix caldifontis Chernousova et al., 2009
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| Species | Thiothrix defluvii Howarth et al., 1999
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| Species | Thiothrix disciformis Aruga et al., 2002
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| Species | Thiothrix eikelboomii Howarth et al., 1999 emend. Aruga et al., 2002
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| Species | Thiothrix flexilis Aruga et al., 2002
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| Species | Thiothrix fructosivorans Howarth et al., 1999
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| Species | Thiothrix lacustris Chernousova et al., 2009
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| Species | Thiothrix nivea (Rabenhorst, 1865) Winogradsky, 1888
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| Species | Thiothrix unzii Howarth et al., 1999
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